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Frataxin from Psychromonas ingrahamii as a model to study stability modulation within CyaY protein family

Analyse Frataxin from Psychromonas ingrahamii as a model to study stability modulation… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4HS5
Type: protein
Length: 210 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.45
Source: Psychromonas ingrahamii
Molecule: Protein CyaY
UniProt: A1SR01
Pockets: 1 · best druggability 0.63

Structure

x-ray diffraction · resolution 1.45 · 1 distinct chain · 36% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Protein CyaY	protein	105	36% helix, 34% strand	A1SR01

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	415	0.63	0.77	52	empty

Interfaces

1 interface between chains.

A–B · 443 Å² buried · 3 hydrogen bonds · protein-protein

Compared structures

4HS5 · Frataxin from psychromonas ingrahamii as a model to study stability modulation within… · the same entry in another collection · chain A against A, TM-score 1.00
A1SR01 · AlphaFold monomer V2.0 prediction for iron-sulfur cluster assembly protein cyay (A1SR01) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A1SR01
Elsewhere: RCSB PDB 4HS5 · PDBe 4HS5 · UniProt A1SR01

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