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Structure of the apo-rFnBPA(189-505) from Staphylococcus aureus

Analyse Structure of the apo-rFnBPA(189-505) from Staphylococcus aureus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4B5Z
Type: protein
Length: 310 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.2
Source: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS NCTC 8325
Molecule: Fibronectin-binding protein a
UniProt: P14738
Pockets: 2 · best druggability 0.63

Structure

x-ray diffraction · resolution 2.2 · 1 distinct chain · 8% helix, 52% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Fibronectin-binding protein a	protein	310	8% helix, 52% strand	P14738

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	372	0.63	0.78	49	empty
2	64	0.39	0.79	12	empty

Compared structures

4B5Z · Structure of the apo-RFNBPA(189-505) from staphylococcus aureus · the same entry in another collection · chain A against A, TM-score 1.00
P14738 · AlphaFold monomer V2.0 prediction for fibronectin-binding protein a (P14738) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P14738
Elsewhere: RCSB PDB 4B5Z · PDBe 4B5Z · UniProt P14738

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