Research workbench
Saccharum officinarum canecystatin-1 in space group P6422
Analyse Saccharum officinarum canecystatin-1 in space group P6422 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3UL6
- Type
- protein
- Length
- 159 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.63
- Source
- Saccharum officinarum
- Molecule
- Canecystatin-1
- UniProt
- Q7Y0Q9
Structure
x-ray diffraction · resolution 2.63 · 2 distinct chains · 21% helix, 57% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Canecystatin-1 | protein | 79 | 20% helix, 57% strand | Q7Y0Q9 |
| B | Canecystatin-1 | protein | 80 | 23% helix, 56% strand | Q7Y0Q9 |
Ligands and binding sites
- PE4 · 2-{2-[2-(2-{2-[2-(2-ethoxy-ethoxy)-ethoxy]-ethoxy}-ethoxy)-ethoxy]-ethoxy}-ethanol · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 2000 Ų buried · 38 hydrogen bonds · protein-protein
Compared structures
- 3UL6 · Saccharum officinarum canecystatin-1 in space group P6422 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7Y0Q9
- Elsewhere: RCSB PDB 3UL6 · PDBe 3UL6 · UniProt Q7Y0Q9
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