Research workbench
Crystal structure of a putative racemase
Analyse Crystal structure of a putative racemase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3MKC
- Type
- protein
- Length
- 380 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.77
- Source
- Pseudovibrio sp. JE062
- Molecule
- racemase
- UniProt
- B6R2Z6
- Pockets
- 2 · best druggability 0.52
Structure
x-ray diffraction · resolution 1.77 · 1 distinct chain · 40% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | racemase | protein | 380 | 40% helix, 17% strand | B6R2Z6 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 113 | 0.52 | 0.82 | 24 | empty |
| 2 | 250 | 0.51 | 0.75 | 34 | empty |
Modifications
Observed in the structure: 9 modified (engineered).
Compared structures
- 3MKC · Crystal structure of a putative racemase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B6R2Z6
- Elsewhere: RCSB PDB 3MKC · PDBe 3MKC · UniProt B6R2Z6
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