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Crystal structure of the amino terminal coiled coil domain of the Mycobacterium tuberculosis proteasomal ATPase Mpa
Analyse Crystal structure of the amino terminal coiled coil domain of the Mycobacterium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3M9H
- Type
- protein
- Length
- 258 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2
- Source
- Mycobacterium tuberculosis
- Molecule
- Proteasome-associated ATPase
- UniProt
- P63345
- Pockets
- 2 · best druggability 0.72
Structure
x-ray diffraction · resolution 2 · 1 distinct chain · 93% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F | Proteasome-associated ATPase | protein | 43 | 93% helix, 0% strand | P63345 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 50 | 0.72 | 0.98 | 14 | empty |
| 2 | 73 | 0.31 | 0.74 | 15 | empty |
Interfaces
11 interfaces between chains.
- B–D · 1194 Ų buried · 9 hydrogen bonds · protein-protein
- A–C · 1166 Ų buried · 10 hydrogen bonds · protein-protein
- B–C · 1020 Ų buried · 7 hydrogen bonds · protein-protein
- A–D · 1007 Ų buried · 7 hydrogen bonds · protein-protein
- C–F · 298 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 3M9H · Crystal structure of the amino terminal coiled coil domain of the mycobacterium… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P63345
- Elsewhere: RCSB PDB 3M9H · PDBe 3M9H · UniProt P63345
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