Research workbench
Crystal structure of an uncharacterized cystatin fold protein (saro_2299) from novosphingobium aromaticivorans dsm at 1.90 A resolution
Analyse Crystal structure of an uncharacterized cystatin fold protein (saro_2299) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3FF2
- Type
- protein
- Length
- 117 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.9
- Source
- Novosphingobium aromaticivorans DSM 12444
- Molecule
- uncharacterized cystatin fold protein (YP_497570.1) from NTF2 superfamily
- UniProt
- Q2G5Y7
- Pockets
- 1 · best druggability 0.54
Structure
x-ray diffraction · resolution 1.9 · 1 distinct chain · 28% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | uncharacterized cystatin fold protein (YP_497570.1) from NTF2 superfamily | protein | 117 | 28% helix, 42% strand | Q2G5Y7 |
Ligands and binding sites
- ACT · Acetate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 104 | 0.54 | 0.83 | 23 | ACT |
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 3FF2 · Crystal structure of an uncharacterized cystatin fold protein (SARO_2299) from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2G5Y7
- Elsewhere: RCSB PDB 3FF2 · PDBe 3FF2 · UniProt Q2G5Y7
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