Research workbench
Adrenodoxin-like ferredoxin Etp1fd(516-618) of Schizosaccharomyces pombe mitochondria
Analyse Adrenodoxin-like ferredoxin Etp1fd(516-618) of Schizosaccharomyces pombe… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2WLB
- Type
- protein
- Length
- 204 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.6
- Source
- SCHIZOSACCHAROMYCES POMBE
- Molecule
- Electron transfer protein 1, mitochondrial
- UniProt
- Q10361
- Ligands
- FES
Structure
x-ray diffraction · resolution 2.6 · 2 distinct chains · 26% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Electron transfer protein 1, mitochondrial | protein | 103 | 25% helix, 25% strand | Q10361 |
| B | Electron transfer protein 1, mitochondrial | protein | 101 | 27% helix, 26% strand | Q10361 |
Ligands and binding sites
- FES · Fe2/s2 (inorganic) cluster · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 633 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 2WLB · Adrenodoxin-like ferredoxin ETP1FD(516-618) of schizosaccharomyces pombe mitochondria · the same entry in another collection · chain A against A, TM-score 1.00
- Q10361 · AlphaFold monomer V2.0 prediction for electron transfer protein 1, mitochondrial (Q10361) · a predicted model of the same protein · chain B against A, TM-score 0.77
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q10361
- Elsewhere: RCSB PDB 2WLB · PDBe 2WLB · UniProt Q10361
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