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NMR solution structure of a minimal transmembrane beta-barrel platform protein

Analyse NMR solution structure of a minimal transmembrane beta-barrel platform protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2JMM
Type: protein
Length: 156 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: NOT
Source: Escherichia coli
Molecule: Outer membrane protein A
UniProt: P0A910
Pockets: 2 · best druggability 0.61

Structure

solution nmr · resolution NOT · 1 distinct chain · 0% helix, 55% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Outer membrane protein A	protein	156	0% helix, 55% strand	P0A910

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	288	0.61	0.79	39	empty
2	160	0.55	0.81	26	empty

Compared structures

2JMM · NMR solution structure of a minimal transmembrane beta-barrel platform protein · the same entry in another collection · chain A against A, TM-score 1.00
P0A910 · AlphaFold monomer V2.0 prediction for outer membrane protein a (P0A910) · a predicted model of the same protein · chain A against A, TM-score 0.66

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A910
Elsewhere: RCSB PDB 2JMM · PDBe 2JMM · UniProt P0A910

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