GL1X · GenesisL1 explorer

Research workbench

Crystal Structure of Protein of Unknown Function ATU1913 from Agrobacterium tumefaciens str. C58

Analyse Crystal Structure of Protein of Unknown Function ATU1913 from Agrobacterium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2B1Y
Type
protein
Length
101 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.8
Source
Agrobacterium tumefaciens str.
Molecule
hypothetical protein Atu1913
UniProt
Q8UE48
Ligands
SO4
Pockets
2 · best druggability 0.59

Structure

x-ray diffraction · resolution 1.8 · 1 distinct chain · 10% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
Ahypothetical protein Atu1913protein10110% helix, 0% strandQ8UE48

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12680.590.7822empty
22960.510.7432empty

Modifications

Observed in the structure: 3 modified (engineered).

Compared structures

  • 2B1Y · Crystal structure of protein of unknown function ATU1913 from agrobacterium tumefaciens… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.