Research workbench

MJ0158, NaBH4-reduced form

Analyse MJ0158, NaBH4-reduced form in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2AEV
Type: protein
Length: 366 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2
Source: Methanocaldococcus jannaschii
Molecule: Hypothetical protein MJ0158
UniProt: Q57622
Ligands: SO4
Pockets: 2 · best druggability 0.64

Structure

x-ray diffraction · resolution 2 · 1 distinct chain · 48% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical protein MJ0158	protein	366	48% helix, 17% strand	Q57622

Ligands and binding sites

SO4 · Sulfate ion · ion · 9 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	338	0.64	0.80	52	SO4
2	55	0.25	0.72	16	empty

Modifications

Observed in the structure: 1 modified (cofactor).

Compared structures

2AEV · MJ0158, NABH4-reduced form · the same entry in another collection · chain A against A, TM-score 1.00
Q57622 · AlphaFold monomer V2.0 prediction for UPF0425 pyridoxal phosphate- dependent protein… · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q57622
Elsewhere: RCSB PDB 2AEV · PDBe 2AEV · UniProt Q57622

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