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NMR structure of gamma herpesvirus 68 a viral Bcl-2 homolog

Analyse NMR structure of gamma herpesvirus 68 a viral Bcl-2 homolog in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2ABO
Type: protein
Length: 131 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: NOT
Source: Murid herpesvirus 4
Molecule: bcl-2 homolog
UniProt: P89884
Pockets: 1 · best druggability 0.40

Structure

solution nmr · resolution NOT · 1 distinct chain · 57% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	bcl-2 homolog	protein	131	57% helix, 0% strand	P89884

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	78	0.40	0.78	16	empty

Compared structures

2ABO · NMR structure of gamma herpesvirus 68 a viral BCL-2 homolog · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P89884
Elsewhere: RCSB PDB 2ABO · PDBe 2ABO · UniProt P89884

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