Research workbench
X-ray crystal structure of putative citrate lyase alpha chain/citrate-ACP transferase [Salmonella typhimurium]
Analyse X-ray crystal structure of putative citrate lyase alpha chain/citrate-ACP… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1XR4
- Type
- protein
- Length
- 1,012 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.37
- Source
- Salmonella typhimurium
- Molecule
- putative citrate lyase alpha chain/citrate-ACP transferase
- UniProt
- Q8ZRY1
- Pockets
- 13 · best druggability 0.82
Structure
x-ray diffraction · resolution 2.37 · 1 distinct chain · 33% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | putative citrate lyase alpha chain/citrate-ACP transferase | protein | 506 | 33% helix, 23% strand | Q8ZRY1 |
Pockets
13 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1048 | 0.82 | 0.83 | 83 | empty |
| 2 | 534 | 0.70 | 0.80 | 57 | empty |
| 3 | 446 | 0.68 | 0.80 | 45 | empty |
| 4 | 233 | 0.54 | 0.77 | 38 | empty |
| 5 | 183 | 0.49 | 0.76 | 27 | empty |
Interfaces
1 interface between chains.
- A–B · 3638 Ų buried · 46 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 24 modified (engineered).
Compared structures
- 1XR4 · X-ray crystal structure of putative citrate lyase alpha CHAIN/CITRATE- acp transferase… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ZRY1
- Elsewhere: RCSB PDB 1XR4 · PDBe 1XR4 · UniProt Q8ZRY1
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