Research workbench

Pom34-Pom152 membrane attachment site yeast NPC

Analyse Pom34-Pom152 membrane attachment site yeast NPC in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 8T9L
Type: protein
Length: 436 residues
Chains: 4
Method: electron microscopy
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 7.0
Source: Saccharomyces cerevisiae
Molecule: Nucleoporin POM152; Nucleoporin POM34
UniProt: P39685, Q12445

Structure

electron microscopy · resolution 7.0 · 2 distinct chains · 77% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B, D	Nucleoporin POM152	protein	110	74% helix, 0% strand	P39685
A, C	Nucleoporin POM34	protein	108	81% helix, 0% strand	Q12445

Compared structures

Q12445 · AlphaFold monomer V2.0 prediction for nucleoporin POM34 (Q12445) · a predicted model of the same protein · chain A against A, TM-score 0.43
P39685 · AlphaFold monomer V2.0 prediction for nucleoporin POM152 (P39685) · a predicted model of the same protein · chain B against A, TM-score 0.33

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P39685
Every structure of UniProt Q12445
Elsewhere: RCSB PDB 8T9L · PDBe 8T9L · UniProt P39685 · UniProt Q12445

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