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Crystal structure of DnaQ domain of Streptococcus thermophilus strain DGCC 7710

Analyse Crystal structure of DnaQ domain of Streptococcus thermophilus strain DGCC 7710 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 8H18
Type: protein
Length: 172 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.499
Source: Streptococcus thermophilus DGCC 7710
Molecule: DnaQ
Ligands: MG
Pockets: 1 · best druggability 0.49

Structure

x-ray diffraction · resolution 1.499 · 1 distinct chain · 43% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DnaQ	protein	172	43% helix, 19% strand	—

Ligands and binding sites

MG · Magnesium ion · metal · 2 copies · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	162	0.49	0.77	23	MG

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 8H18 · PDBe 8H18

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