Research workbench
Crystal Structure of Hepatitis virus A 2C protein 128-335 aa
Analyse Crystal Structure of Hepatitis virus A 2C protein 128-335 aa in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7XT3
- Type
- protein
- Length
- 173 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.15
- Source
- Hepatovirus A
- Molecule
- Genome polyprotein
- UniProt
- G4W9T5
- Ligands
- PO4
- Pockets
- 2 · best druggability 0.56
Structure
x-ray diffraction · resolution 2.15 · 1 distinct chain · 35% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Genome polyprotein | protein | 173 | 35% helix, 24% strand | G4W9T5 |
Ligands and binding sites
- PO4 · Phosphate ion · ion · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 155 | 0.56 | 0.81 | 17 | empty |
| 2 | 141 | 0.49 | 0.79 | 16 | PO4 |
Compared structures
- 7XT3 · Crystal structure of hepatitis virus a 2C protein 128-335 aa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G4W9T5
- Elsewhere: RCSB PDB 7XT3 · PDBe 7XT3 · UniProt G4W9T5
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