Research workbench
Triphosphate tunnel metalloenzyme from Sulfolobus acidocaldarius
Analyse Triphosphate tunnel metalloenzyme from Sulfolobus acidocaldarius in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7NS8
- Type
- protein
- Length
- 162 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.3
- Source
- Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157…
- Molecule
- Triphosphate tunnel metalloenzyme Saci_0718
- UniProt
- Q4JAT2
- Ligands
- SO4
- Pockets
- 1 · best druggability 0.45
Structure
x-ray diffraction · resolution 2.3 · 1 distinct chain · 28% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Triphosphate tunnel metalloenzyme Saci_0718 | protein | 162 | 28% helix, 48% strand | Q4JAT2 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 2 copies · chains A
- CXS · 3-cyclohexyl-1-propylsulfonic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 203 | 0.45 | 0.74 | 34 | SO4 |
Compared structures
- 7NS8 · Triphosphate tunnel metalloenzyme from sulfolobus acidocaldarius · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4JAT2
- Elsewhere: RCSB PDB 7NS8 · PDBe 7NS8 · UniProt Q4JAT2
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