Research workbench
Wild-type Hydrogenobacter thermophilus ferredoxin 1
Analyse Wild-type Hydrogenobacter thermophilus ferredoxin 1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7M1N
- Type
- protein
- Length
- 142 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.06
- Source
- Hydrogenobacter thermophilus
- Molecule
- Putative ferredoxin
- UniProt
- Q75VV9
- Ligands
- SF4
Structure
x-ray diffraction · resolution 2.06 · 1 distinct chain · 25% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Putative ferredoxin | protein | 71 | 25% helix, 27% strand | Q75VV9 |
Ligands and binding sites
- SF4 · Iron/sulfur cluster · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 390 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 7M1N · Wild-type hydrogenobacter thermophilus ferredoxin 1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q75VV9
- Elsewhere: RCSB PDB 7M1N · PDBe 7M1N · UniProt Q75VV9
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