Research workbench
Structure of deamidated Ubiquitin
Analyse Structure of deamidated Ubiquitin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7F0N
- Type
- protein
- Length
- 76 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.6
- Source
- Homo sapiens
- Molecule
- Ubiquitin-40S ribosomal protein S27a
- UniProt
- J3QTR3
- Ligands
- NA, K, MG
Structure
x-ray diffraction · resolution 1.6 · 1 distinct chain · 24% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin-40S ribosomal protein S27a | protein | 76 | 24% helix, 33% strand | J3QTR3 |
Ligands and binding sites
- NA · Sodium ion · metal · 10 copies · chains A
- K · Potassium ion · metal · chains A
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7F0N · Structure of deamidated ubiquitin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J3QTR3
- Elsewhere: RCSB PDB 7F0N · PDBe 7F0N · UniProt J3QTR3
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