Research workbench
High-resolution structure of the complex of HHR23A ubiquitin-like domain and the C-terminal ubiquitin-interacting motif of proteasome subunit S5a
Analyse High-resolution structure of the complex of HHR23A ubiquitin-like domain and… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1P9D
- Type
- protein
- Length
- 110 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- NOT
- Source
- Homo sapiens
- Molecule
- 26S proteasome non-ATPase regulatory subunit 4; UV excision repair protein RAD23 homolog A
- UniProt
- P55036, P54725
Structure
solution nmr · resolution NOT · 2 distinct chains · 29% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| S | 26S proteasome non-ATPase regulatory subunit 4 | protein | 32 | 53% helix, 0% strand | P55036 |
| U | UV excision repair protein RAD23 homolog A | protein | 78 | 19% helix, 28% strand | P54725 |
Interfaces
1 interface between chains.
- S–U · 753 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 1P9D · High-resolution structure of the complex of HHR23A ubiquitin-like domain and the… · the same entry in another collection · chain S against S, TM-score 1.00
- P54725 · AlphaFold monomer V2.0 prediction for UV excision repair protein RAD23 homolog a (P54725) · a predicted model of the same protein · chain U against A, TM-score 0.82
- P55036 · AlphaFold monomer V2.0 prediction for 26S proteasome non-ATPase regulatory subunit 4… · a predicted model of the same protein · chain S against A, TM-score 0.39
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55036
- Every structure of UniProt P54725
- Elsewhere: RCSB PDB 1P9D · PDBe 1P9D · UniProt P55036 · UniProt P54725
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