Research workbench
Solution structure of protein ARR_CleD in complex with c-di-GMP
Analyse Solution structure of protein ARR_CleD in complex with c-di-GMP in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6SFT
- Type
- protein
- Length
- 36 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- NOT
- Source
- Caulobacter vibrioides (strain NA1000 / CB15N)
- Molecule
- Two-component receiver protein CleD
- UniProt
- A0A0H3CCM2
- Ligands
- C2E
Structure
solution nmr · resolution NOT · 1 distinct chain · 8% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Two-component receiver protein CleD | protein | 36 | 8% helix, 11% strand | A0A0H3CCM2 |
Ligands and binding sites
- C2E · 9,9'-[(2r,3r,3as,5s,7ar,9r,10r,10as,12s,14ar)-3,5,10, 12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3, 2-D:3',2'-J][1,3,7,9,2, 8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) · ligand · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6SFT · Solution structure of protein ARR_CLED in complex with C-di-gmp · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0H3CCM2
- Elsewhere: RCSB PDB 6SFT · PDBe 6SFT · UniProt A0A0H3CCM2
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