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Photoactive Yellow Protein PYP 80ps

Analyse Photoactive Yellow Protein PYP 80ps in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6P5E
Type: protein
Length: 125 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.6
Source: Halorhodospira halophila
Molecule: Photoactive yellow protein
UniProt: P16113

Structure

x-ray diffraction · resolution 1.6 · 1 distinct chain · 31% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Photoactive yellow protein	protein	125	31% helix, 30% strand	P16113

Modifications

Observed in the structure: 1 modified (nonstandard).

Compared structures

6P5E · Photoactive yellow protein pyp 80PS · the same entry in another collection · chain A against A, TM-score 1.00
P16113 · AlphaFold monomer V2.0 prediction for photoactive yellow protein (P16113) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P16113
Elsewhere: RCSB PDB 6P5E · PDBe 6P5E · UniProt P16113

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