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PD-L1 IgV domain V76T with fragment

Analyse PD-L1 IgV domain V76T with fragment in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6NP9
Type: protein
Length: 122 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.27
Source: Homo sapiens
Molecule: Programmed cell death 1 ligand 1
UniProt: Q9NZQ7
Ligands: SO4

Structure

x-ray diffraction · resolution 1.27 · 1 distinct chain · 16% helix, 48% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Programmed cell death 1 ligand 1	protein	122	16% helix, 48% strand	Q9NZQ7

Ligands and binding sites

SO4 · Sulfate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

6NP9 · Pd-L1 igv domain V76T with fragment · the same entry in another collection · chain A against A, TM-score 1.00
Q9NZQ7 · AlphaFold monomer V2.0 prediction for programmed cell death 1 ligand 1 (Q9NZQ7) · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9NZQ7
Elsewhere: RCSB PDB 6NP9 · PDBe 6NP9 · UniProt Q9NZQ7

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