Research workbench
Atomic structure of Non-Structural protein 1 of bluetongue virus
Analyse Atomic structure of Non-Structural protein 1 of bluetongue virus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6N9Y
- Type
- protein
- Length
- 552 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 4.0
- Source
- Bluetongue virus 23
- Molecule
- Non-structural protein 1
- UniProt
- L7WU69
- Pockets
- 7 · best druggability 0.78
Structure
electron microscopy · resolution 4.0 · 1 distinct chain · 47% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Non-structural protein 1 | protein | 552 | 47% helix, 9% strand | L7WU69 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 927 | 0.78 | 0.81 | 98 | empty |
| 2 | 125 | 0.57 | 0.84 | 17 | empty |
| 3 | 74 | 0.43 | 0.81 | 15 | empty |
| 4 | 122 | 0.43 | 0.76 | 21 | empty |
| 5 | 81 | 0.39 | 0.78 | 22 | empty |
Compared structures
- 6N9Y · Atomic structure of non-structural protein 1 of bluetongue virus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt L7WU69
- Elsewhere: RCSB PDB 6N9Y · PDBe 6N9Y · UniProt L7WU69
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