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Marsupenaeus japonicus ferritin mutant (T158H) pH 4.0

Analyse Marsupenaeus japonicus ferritin mutant (T158H) pH 4.0 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6LS2
Type: protein
Length: 338 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.6
Source: Penaeus japonicus
Molecule: Ferritin
EC: 1.16.3.1
UniProt: T2B7E1
Pockets: 3 · best druggability 0.79

Structure

x-ray diffraction · resolution 1.6 · 1 distinct chain · 75% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Ferritin (EC 1.16.3.1)	protein	169	75% helix, 1% strand	T2B7E1

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	100	0.79	0.98	16	empty
2	52	0.44	0.84	15	empty
3	72	0.41	0.79	15	empty

Interfaces

1 interface between chains.

A–B · 1450 Å² buried · 30 hydrogen bonds · protein-protein

Compared structures

6LS2 · Marsupenaeus japonicus ferritin mutant (T158H) pH 4.0 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt T2B7E1
Elsewhere: RCSB PDB 6LS2 · PDBe 6LS2 · UniProt T2B7E1

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