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Crystal structure of Synaptotagmin-7 C2B in complex with IP6

Analyse Crystal structure of Synaptotagmin-7 C2B in complex with IP6 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6LCY
Type: protein
Length: 138 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.301
Source: Mus musculus
Molecule: Synaptotagmin-7
UniProt: Q9R0N7
Ligands: IHP

Structure

x-ray diffraction · resolution 2.301 · 1 distinct chain · 12% helix, 49% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Synaptotagmin-7	protein	138	12% helix, 49% strand	Q9R0N7

Ligands and binding sites

IHP · Inositol hexakisphosphate · ligand · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6LCY · Crystal structure of synaptotagmin-7 C2B in complex with IP6 · the same entry in another collection · chain A against A, TM-score 1.00
Q9R0N7 · AlphaFold monomer V2.0 prediction for synaptotagmin-7 (Q9R0N7) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9R0N7
Elsewhere: RCSB PDB 6LCY · PDBe 6LCY · UniProt Q9R0N7

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