Research workbench
X-ray crystal structure of the mutant green fluorescent protein
Analyse X-ray crystal structure of the mutant green fluorescent protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6L27
- Type
- protein
- Length
- 226 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 0.77
- Source
- Aequorea victoria
- Molecule
- Green fluorescent protein
- UniProt
- P42212
- Pockets
- 2 · best druggability 0.73
Structure
x-ray diffraction · resolution 0.77 · 1 distinct chain · 11% helix, 51% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Green fluorescent protein | protein | 226 | 11% helix, 51% strand | P42212 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 75 | 0.73 | 0.97 | 24 | empty |
| 2 | 63 | 0.36 | 0.78 | 15 | empty |
Compared structures
- 6L27 · X-ray crystal structure of the mutant green fluorescent protein · the same entry in another collection · chain A against A, TM-score 1.00
- P42212 · AlphaFold monomer V2.0 prediction for green fluorescent protein (P42212) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P42212
- Elsewhere: RCSB PDB 6L27 · PDBe 6L27 · UniProt P42212
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