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Solution structure of camelid nanobody Nb26 against aflatoxin B1

Analyse Solution structure of camelid nanobody Nb26 against aflatoxin B1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6IYN
Type: protein
Length: 131 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: NOT
Source: Vicugna pacos
Molecule: Nb26
Pockets: 1 · best druggability 0.55

Structure

solution nmr · resolution NOT · 1 distinct chain · 5% helix, 50% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nb26	protein	131	5% helix, 50% strand	—

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	220	0.55	0.78	25	empty

Compared structures

6IYN · Solution structure of camelid nanobody NB26 against aflatoxin B1 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 6IYN · PDBe 6IYN

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