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Crystal structure of Phosphite Dehydrogenase from Ralstonia sp. 4506
Analyse Crystal structure of Phosphite Dehydrogenase from Ralstonia sp. 4506 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6IH2
- Type
- protein
- Length
- 658 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.048
- Source
- Ralstonia sp. 4506
- Molecule
- Phosphite dehydrogenase
- UniProt
- G4XDR8
- Pockets
- 7 · best druggability 0.82
Structure
x-ray diffraction · resolution 2.048 · 1 distinct chain · 39% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Phosphite dehydrogenase | protein | 329 | 39% helix, 16% strand | G4XDR8 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 565 | 0.82 | 0.88 | 71 | empty |
| 2 | 243 | 0.73 | 0.87 | 32 | empty |
| 3 | 102 | 0.63 | 0.88 | 26 | empty |
| 4 | 95 | 0.49 | 0.81 | 22 | empty |
| 5 | 53 | 0.46 | 0.85 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 1318 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 6IH2 · Crystal structure of phosphite dehydrogenase from ralstonia sp. 4506 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G4XDR8
- Elsewhere: RCSB PDB 6IH2 · PDBe 6IH2 · UniProt G4XDR8
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