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Ni(II)-substituted Wells-Dawson binding to Hen Egg-White Lysozyme (HEWL)

Analyse Ni(II)-substituted Wells-Dawson binding to Hen Egg-White Lysozyme (HEWL) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6HY6
Type
protein
Length
128 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.87
Source
Gallus gallus
Molecule
Lysozyme C
EC
3.2.1.17
UniProt
P00698
Ligands
GXZ, CL

Structure

x-ray diffraction · resolution 1.87 · 1 distinct chain · 41% helix, 11% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
BLysozyme C (EC 3.2.1.17)protein12841% helix, 11% strandP00698

Ligands and binding sites

  • GXZ · Ni(II)-substituted Wells-Dawson · ligand · chains B
  • CL · Chloride ion · ion · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

  • 6HY6 · NI(II)-substituted wells-dawson binding to hen egg-white lysozyme (hewl) · the same entry in another collection · chain B against B, TM-score 1.00

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