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Ferric murine neuroglobin F106A mutant

Analyse Ferric murine neuroglobin F106A mutant in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6H5Z
Type: protein
Length: 146 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.8
Source: Mus musculus
Molecule: Neuroglobin
UniProt: Q9ER97
Ligands: HEM, SO4
Pockets: 1 · best druggability 0.79

Structure

x-ray diffraction · resolution 1.8 · 1 distinct chain · 77% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Neuroglobin	protein	146	77% helix, 1% strand	Q9ER97

Ligands and binding sites

HEM · Protoporphyrin IX containing Fe · ligand · chains A
SO4 · Sulfate ion · ion · chains A
DIO · 1,4-diethylene dioxide · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	309	0.79	0.89	35	HEM

Compared structures

6H5Z · Ferric murine neuroglobin F106A mutant · the same entry in another collection · chain A against A, TM-score 1.00
Q9ER97 · AlphaFold monomer V2.0 prediction for neuroglobin (Q9ER97) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9ER97
Elsewhere: RCSB PDB 6H5Z · PDBe 6H5Z · UniProt Q9ER97

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