Research workbench
A polyamorous repressor: deciphering the evolutionary strategy used by the phage-inducible chromosomal islands to spread in nature.
Analyse A polyamorous repressor: deciphering the evolutionary strategy used by the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6H4B
- Type
- protein
- Length
- 219 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.902
- Source
- Staphylococcus aureus; Staphylococcus virus 69
- Molecule
- ORF026; Orf20
- UniProt
- Q4ZDP4, Q9F0J8
- Pockets
- 4 · best druggability 0.60
Structure
x-ray diffraction · resolution 2.902 · 2 distinct chains · 69% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ORF026 | protein | 135 | 67% helix, 0% strand | Q4ZDP4 |
| B | Orf20 | protein | 84 | 73% helix, 0% strand | Q9F0J8 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 291 | 0.60 | 0.78 | 28 | empty |
| 2 | 61 | 0.46 | 0.83 | 11 | empty |
| 3 | 52 | 0.27 | 0.74 | 11 | empty |
| 4 | 55 | 0.27 | 0.73 | 13 | empty |
Interfaces
1 interface between chains.
- A–B · 1158 Ų buried · 13 hydrogen bonds · protein-protein
Compared structures
- 6H4B · A polyamorous repressor: deciphering the evolutionary strategy used by the… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4ZDP4
- Every structure of UniProt Q9F0J8
- Elsewhere: RCSB PDB 6H4B · PDBe 6H4B · UniProt Q4ZDP4 · UniProt Q9F0J8
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