Research workbench

Crystal structure of oleate hydratase from Stenotrophomonas sp. KCTC 12332

Analyse Crystal structure of oleate hydratase from Stenotrophomonas sp. KCTC 12332 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5Z70
Type: protein
Length: 1,081 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.91
Source: Stenotrophomonas sp. KCTC 12332
Molecule: Oleate hydratase
UniProt: A0A126NKL7
Pockets: 9 · best druggability 0.80

Structure

x-ray diffraction · resolution 2.91 · 2 distinct chains · 35% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Oleate hydratase	protein	543	34% helix, 17% strand	A0A126NKL7
B	Oleate hydratase	protein	538	35% helix, 18% strand	A0A126NKL7

Pockets

9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1008	0.80	0.82	82	empty
2	870	0.78	0.81	81	empty
3	52	0.66	0.95	15	empty
4	130	0.43	0.75	20	empty
5	193	0.43	0.73	29	empty

Interfaces

1 interface between chains.

A–B · 65 Å² buried · 1 hydrogen bond · protein-protein

Compared structures

5Z70 · Crystal structure of oleate hydratase from stenotrophomonas sp. kctc 12332 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A126NKL7
Elsewhere: RCSB PDB 5Z70 · PDBe 5Z70 · UniProt A0A126NKL7

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.