Research workbench
Crystal structure of the anti-CRISPR protein, AcrIIA1
Analyse Crystal structure of the anti-CRISPR protein, AcrIIA1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5Y6A
- Type
- protein
- Length
- 292 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2
- Source
- Listeria monocytogenes J0161
- Molecule
- chain A and B
- Pockets
- 2 · best druggability 0.42
Structure
x-ray diffraction · resolution 2 · 1 distinct chain · 70% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | chain A and B | protein | 146 | 70% helix, 1% strand | — |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 68 | 0.42 | 0.80 | 14 | empty |
| 2 | 82 | 0.38 | 0.77 | 20 | empty |
Interfaces
1 interface between chains.
- A–B · 1259 Ų buried · 15 hydrogen bonds · protein-protein
Compared structures
- 5Y6A · Crystal structure of the anti-CRISPR protein, ACRIIA1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5Y6A · PDBe 5Y6A
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