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Crystal structure of Microcystis aeruginosa PCC 7806 aspartate racemase in complex with DL-methyl-aspartate
Analyse Crystal structure of Microcystis aeruginosa PCC 7806 aspartate racemase in… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5XNK
- Type
- protein
- Length
- 229 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.4
- Source
- Microcystis aeruginosa PCC 7806
- Molecule
- McyF
- UniProt
- Q9RNB4
- Pockets
- 1 · best druggability 0.34
Structure
x-ray diffraction · resolution 3.4 · 1 distinct chain · 54% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | McyF | protein | 229 | 54% helix, 13% strand | Q9RNB4 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 82 | 0.34 | 0.75 | 16 | empty |
Modifications
Observed in the structure: 2 modified (nonstandard).
Compared structures
- 5XNK · Crystal structure of microcystis aeruginosa pcc 7806 aspartate racemase in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9RNB4
- Elsewhere: RCSB PDB 5XNK · PDBe 5XNK · UniProt Q9RNB4
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