Research workbench
De Novo Design of Polynuclear Transition Metal Clusters in Helix Bundles-4EH1
Analyse De Novo Design of Polynuclear Transition Metal Clusters in Helix Bundles-4EH1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5WLJ
- Type
- protein
- Length
- 104 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.6
- Molecule
- De Novo Metal Binding Helical Bundle
- Ligands
- ZN
Structure
x-ray diffraction · resolution 1.6 · 1 distinct chain · 92% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | De Novo Metal Binding Helical Bundle | protein | 26 | 92% helix, 0% strand | — |
Ligands and binding sites
- ZN · Zinc ion · metal · 7 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
6 interfaces between chains.
- C–D · 723 Ų buried · 9 hydrogen bonds · protein-protein
- A–B · 709 Ų buried · 10 hydrogen bonds · protein-protein
- B–D · 90 Ų buried · 2 hydrogen bonds · protein-protein
- A–C · 87 Ų buried · 2 hydrogen bonds · protein-protein
- A–D · 40 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 5WLJ · De novo design of polynuclear transition metal clusters in helix bundles-4EH1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5WLJ · PDBe 5WLJ
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