Research workbench
Crystal structure of a galactose-binding Lectin from Mytilus californianus
Analyse Crystal structure of a galactose-binding Lectin from Mytilus californianus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5VBK
- Type
- protein
- Length
- 300 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.788
- Source
- Mytilus californianus
- Molecule
- Lectin
- UniProt
- A0A0P0E482
Structure
x-ray diffraction · resolution 1.788 · 1 distinct chain · 8% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Lectin | protein | 150 | 8% helix, 43% strand | A0A0P0E482 |
Ligands and binding sites
- GOL · Glycerol · additive · 9 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 728 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
- 5VBK · Crystal structure of a galactose-binding lectin from mytilus californianus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0P0E482
- Elsewhere: RCSB PDB 5VBK · PDBe 5VBK · UniProt A0A0P0E482
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