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Sindbis virus capsid (S215A mutant), tetragonal crystal form

Analyse Sindbis virus capsid (S215A mutant), tetragonal crystal form in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1KXB
Type: protein
Length: 158 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.9
Source: Sindbis virus
Molecule: Sindbis virus capsid protein
EC: 3.4.21.-
UniProt: P03316
Pockets: 2 · best druggability 0.38

Structure

x-ray diffraction · resolution 2.9 · 1 distinct chain · 6% helix, 47% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Sindbis virus capsid protein (EC 3.4.21.-)	protein	158	6% helix, 47% strand	P03316

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	64	0.38	0.78	13	empty
2	82	0.33	0.74	15	empty

Compared structures

1KXB · Sindbis virus capsid (S215A mutant), tetragonal crystal form · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P03316
Elsewhere: RCSB PDB 1KXB · PDBe 1KXB · UniProt P03316

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