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Ube4B U-box domain

Analyse Ube4B U-box domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5O75
Type: protein
Length: 71 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.483
Source: Homo sapiens
Molecule: Ubiquitin conjugation factor E4 B
EC: 2.3.2.27
UniProt: O95155
Ligands: SO4

Structure

x-ray diffraction · resolution 1.483 · 1 distinct chain · 38% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ubiquitin conjugation factor E4 B (EC 2.3.2.27)	protein	71	38% helix, 17% strand	O95155

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5O75 · UBE4B U-box domain · the same entry in another collection · chain A against A, TM-score 1.00
O95155 · AlphaFold monomer V2.0 prediction for ubiquitin conjugation factor E4 B (O95155) · a predicted model of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O95155
Elsewhere: RCSB PDB 5O75 · PDBe 5O75 · UniProt O95155

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