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Crystal structure of an ABC transporter Solute Binding Protein from Klebsiella pneumoniae (KPN_01730, target EFI-511059), APO open structure
Analyse Crystal structure of an ABC transporter Solute Binding Protein from Klebsiella… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5HSG
- Type
- protein
- Length
- 285 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.3
- Source
- Klebsiella pneumoniae subsp. pneumoniae
- Molecule
- Putative ABC transporter, nucleotide binding/ATPase protein
- UniProt
- A6T990
- Ligands
- MG
- Pockets
- 1 · best druggability 0.54
Structure
x-ray diffraction · resolution 1.3 · 1 distinct chain · 46% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative ABC transporter, nucleotide binding/ATPase protein | protein | 285 | 46% helix, 20% strand | A6T990 |
Ligands and binding sites
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 295 | 0.54 | 0.75 | 34 | empty |
Modifications
Observed in the structure: 5 modified (engineered).
Compared structures
- 5HSG · Crystal structure of an ABC transporter solute binding protein from klebsiella pneumoniae… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6T990
- Elsewhere: RCSB PDB 5HSG · PDBe 5HSG · UniProt A6T990
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