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Anomalous Neutron phased crystal structure of 113Cd-substituted Perdeuterated Pyrococcus furiosus rubredoxin to 1.75A resolution at 295K

Analyse Anomalous Neutron phased crystal structure of 113Cd-substituted Perdeuterated… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5AI2
Type
protein
Length
54 residues
Chains
1
Method
neutron diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.75
Source
PYROCOCCUS FURIOSUS
Molecule
Rubredoxin
UniProt
P24297
Ligands
CD

Structure

neutron diffraction · resolution 1.75 · 1 distinct chain · 17% helix, 26% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ARubredoxinprotein5417% helix, 26% strandP24297

Ligands and binding sites

  • CD · Cadmium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5AI2 · Anomalous neutron phased crystal structure of 113CD- substituted perdeuterated pyrococcus… · the same entry in another collection · chain A against A, TM-score 1.00
  • P24297 · AlphaFold monomer V2.0 prediction for rubredoxin (P24297) · a predicted model of the same protein · chain A against A, TM-score 0.97

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