Research workbench
Structure of the C. elegans SAS-5 Implico dimerization domain
Analyse Structure of the C. elegans SAS-5 Implico dimerization domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4YNH
- Type
- protein
- Length
- 116 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1
- Source
- Caenorhabditis elegans
- Molecule
- Spindle assembly abnormal protein 5
- UniProt
- Q20010
Structure
x-ray diffraction · resolution 1 · 2 distinct chains · 79% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Spindle assembly abnormal protein 5 | protein | 58 | 79% helix, 0% strand | Q20010 |
| B | Spindle assembly abnormal protein 5 | protein | 58 | 79% helix, 0% strand | Q20010 |
Interfaces
1 interface between chains.
- A–B · 1621 Ų buried · 21 hydrogen bonds · protein-protein
Compared structures
- 4YNH · Structure of the C. elegans sas-5 implico dimerization domain · the same entry in another collection · chain A against A, TM-score 1.00
- Q20010 · AlphaFold monomer V2.0 prediction for spindle assembly abnormal protein 5 (Q20010) · a predicted model of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q20010
- Elsewhere: RCSB PDB 4YNH · PDBe 4YNH · UniProt Q20010
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