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Crystal structure of the FtsH ATPase domain from Thermus thermophilus

Analyse Crystal structure of the FtsH ATPase domain from Thermus thermophilus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1IY2
Type: protein
Length: 245 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 3.2
Source: Thermus thermophilus
Molecule: ATP-dependent metalloprotease FtsH
UniProt: Q9LCZ4
Ligands: SO4
Pockets: 1 · best druggability 0.48

Structure

x-ray diffraction · resolution 3.2 · 1 distinct chain · 49% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	ATP-dependent metalloprotease FtsH	protein	245	49% helix, 12% strand	Q9LCZ4

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	124	0.48	0.79	27	empty

Compared structures

1IY2 · Crystal structure of the ftsh ATPase domain from thermus thermophilus · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9LCZ4
Elsewhere: RCSB PDB 1IY2 · PDBe 1IY2 · UniProt Q9LCZ4

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