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Crystal structure of Arc1p-C

Analyse Crystal structure of Arc1p-C in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4R1J
Type: protein
Length: 174 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.4
Source: Saccharomyces cerevisiae
Molecule: GU4 nucleic-binding protein 1
UniProt: P46672
Pockets: 1 · best druggability 0.50

Structure

x-ray diffraction · resolution 1.4 · 1 distinct chain · 10% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	GU4 nucleic-binding protein 1	protein	174	10% helix, 36% strand	P46672

Ligands and binding sites

GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	222	0.50	0.75	31	GOL

Compared structures

4R1J · Crystal structure of ARC1P-C · the same entry in another collection · chain A against A, TM-score 1.00
P46672 · AlphaFold monomer V2.0 prediction for tRNA-aminoacylation cofactor ARC1 (P46672) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P46672
Elsewhere: RCSB PDB 4R1J · PDBe 4R1J · UniProt P46672

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