Research workbench
Crystal Structure of THA8 in complex with Zm1a-6 RNA
Analyse Crystal Structure of THA8 in complex with Zm1a-6 RNA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4N2S
- Type
- protein + RNA
- Length
- 201 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3
- Source
- Brachypodium distachyon; SYNTHETIC CONSTRUCT
- Molecule
- THA8 RNA binding protein; Zm1a-6 RNA
- UniProt
- I1HB13
- Pockets
- 2 · best druggability 0.30
Structure
x-ray diffraction · resolution 3 · 2 distinct chains · 71% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | THA8 RNA binding protein | protein | 197 | 71% helix, 0% strand | I1HB13 |
| B | Zm1a-6 RNA | rna | 4 | — | — |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 51 | 0.30 | 0.76 | 13 | empty |
| 2 | 50 | 0.24 | 0.73 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 346 Ų buried · 7 hydrogen bonds · protein-nucleic
Compared structures
- 4N2S · Crystal structure of THA8 in complex with ZM1A-6 RNA · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt I1HB13
- Elsewhere: RCSB PDB 4N2S · PDBe 4N2S · UniProt I1HB13
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.