Research workbench
AlphaFold monomer V2.0 prediction for D-alanine--D-alanine ligase (A6UB80)
Analyse AlphaFold monomer V2.0 prediction for D-alanine--D-alanine ligase (A6UB80) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A6UB80
- Type
- protein
- Length
- 308 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbDA05C32aD6eE153C8C5A78dfa48d7Ba25694fea
- Molecule
- D-alanine--D-alanine ligase
- UniProt
- A6UB80
- Pockets
- 2 · best druggability 0.72
Structure
1 distinct chain · 32% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | D-alanine--D-alanine ligase | protein | 308 | 32% helix, 25% strand | A6UB80 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 158 | 0.72 | 0.90 | 33 | empty |
| 2 | 135 | 0.72 | 0.92 | 33 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6UB80
- Elsewhere: UniProt A6UB80 · AlphaFold DB A6UB80
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