Research workbench
AlphaFold monomer V2.0 prediction for D-alanine--D-alanine ligase (A9I4V9)
Analyse AlphaFold monomer V2.0 prediction for D-alanine--D-alanine ligase (A9I4V9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A9I4V9
- Type
- protein
- Length
- 326 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6913491A082FA6E53D710FF4F219FF9D39dE1941
- Molecule
- D-alanine--D-alanine ligase
- UniProt
- A9I4V9
- Pockets
- 5 · best druggability 0.72
Structure
1 distinct chain · 37% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | D-alanine--D-alanine ligase | protein | 326 | 37% helix, 21% strand | A9I4V9 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 349 | 0.72 | 0.84 | 44 | empty |
| 2 | 94 | 0.70 | 0.94 | 22 | empty |
| 3 | 177 | 0.48 | 0.76 | 29 | empty |
| 4 | 71 | 0.38 | 0.78 | 19 | empty |
| 5 | 76 | 0.32 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9I4V9
- Elsewhere: UniProt A9I4V9 · AlphaFold DB A9I4V9
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