Research workbench

AlphaFold monomer V2.0 prediction for clathrin heavy chain 1 (Q68FD5)

Analyse AlphaFold monomer V2.0 prediction for clathrin heavy chain 1 (Q68FD5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q68FD5
Type: protein
Length: 1,675 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x46EfCa788d03A3e879DAcDb96552AB8Bbc7e20b3
Molecule: Clathrin heavy chain 1
UniProt: Q68FD5
Pockets: 18 · best druggability 0.69

Structure

1 distinct chain · 57% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Clathrin heavy chain 1	protein	1675	57% helix, 11% strand	Q68FD5

Pockets

18 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	324	0.69	0.82	49	empty
2	357	0.64	0.79	36	empty
3	315	0.58	0.77	44	empty
4	187	0.50	0.76	30	empty
5	66	0.43	0.81	13	empty

Compared structures

5ODS · Structure of a phosphoprotein-protein complex · an experimental structure of the same protein · chain A against B, TM-score 0.28
5ODS · Structure of a phosphoprotein-protein complex · an experimental structure of the same protein · chain A against B, TM-score 0.28

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q68FD5
Elsewhere: UniProt Q68FD5 · AlphaFold DB Q68FD5

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