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AlphaFold monomer V2.0 prediction for chymosin (P00794)

Analyse AlphaFold monomer V2.0 prediction for chymosin (P00794) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
P00794
Type
protein
Length
381 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x3298b100681D3A2372Bba3b2f282750dD71629B9
Molecule
Chymosin
UniProt
P00794
Pockets
4 · best druggability 0.63

Structure

1 distinct chain · 20% helix, 40% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AChymosinprotein38120% helix, 40% strandP00794

Pockets

4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12200.630.8328empty
22830.630.8132empty
31730.500.7829empty
4680.330.7514empty

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

  • 1CMS · The three-dimensional structure of recombinant bovine chymosin at 2.3 ångströms resolution · an experimental structure of the same protein · chain A against A, TM-score 0.83
  • 1CMS · The three-dimensional structure of recombinant bovine chymosin at 2.3 ångströms resolution · an experimental structure of the same protein · chain A against A, TM-score 0.83
  • 4AA8 · Bovine chymosin at 1.8A resolution · an experimental structure of the same protein · chain A against A, TM-score 0.83
  • 4AA8 · Bovine chymosin at 1.8A resolution · an experimental structure of the same protein · chain A against A, TM-score 0.83
  • 4AUC · Bovine chymosin in complex with pepstatin a · an experimental structure of the same protein · chain A against A, TM-score 0.83
  • 4AUC · Bovine chymosin in complex with Pepstatin A · an experimental structure of the same protein · chain A against A, TM-score 0.83
  • 3CMS · Engineering enzyme sub-site specificity: preparation, kinetic characterization and X-ray… · an experimental structure of the same protein · chain A against A, TM-score 0.82
  • 3CMS · Engineering enzyme sub-site specificity: preparation, kinetic characterization and X-ray… · an experimental structure of the same protein · chain A against A, TM-score 0.82
  • 4CMS · X-ray analyses of aspartic proteinases IV. structure and refinement at 2.2 ångströms… · an experimental structure of the same protein · chain A against A, TM-score 0.82
  • 4CMS · X-ray analyses of aspartic proteinases IV. structure and refinement at 2.2 ångströms… · an experimental structure of the same protein · chain A against A, TM-score 0.82
  • 1CZI · Chymosin complex with the inhibitor cp-113972 · an experimental structure of the same protein · chain A against E, TM-score 0.82
  • 1CZI · Chymosin complex with the inhibitor cp-113972 · an experimental structure of the same protein · chain A against E, TM-score 0.82

Analyse

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