Research workbench
AlphaFold monomer V2.0 prediction for ceramide synthase 3 (Q1A3B0)
Analyse AlphaFold monomer V2.0 prediction for ceramide synthase 3 (Q1A3B0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1A3B0
- Type
- protein
- Length
- 383 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Ceramide synthase 3
- UniProt
- Q1A3B0
- Pockets
- 10 · best druggability 0.79
Structure
1 distinct chain · 73% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ceramide synthase 3 | protein | 383 | 73% helix, 1% strand | Q1A3B0 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 175 | 0.79 | 0.95 | 31 | empty |
| 2 | 78 | 0.75 | 0.97 | 24 | empty |
| 3 | 54 | 0.54 | 0.89 | 18 | empty |
| 4 | 77 | 0.47 | 0.83 | 14 | empty |
| 5 | 123 | 0.44 | 0.76 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1A3B0
- Elsewhere: UniProt Q1A3B0 · AlphaFold DB Q1A3B0
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