Research workbench

AlphaFold monomer V2.0 prediction for toxin zeta (Q54944)

Analyse AlphaFold monomer V2.0 prediction for toxin zeta (Q54944) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q54944
Type: protein
Length: 287 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x0EA189b2343A464f560b44103f6A3396Da1dA8a9
Molecule: Toxin zeta
UniProt: Q54944
Pockets: 2 · best druggability 0.67

Structure

1 distinct chain · 53% helix, 10% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Toxin zeta	protein	287	53% helix, 10% strand	Q54944

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	635	0.67	0.76	54	empty
2	53	0.40	0.81	12	empty

Compared structures

3Q8X · Structure of a toxin-antitoxin system bound to its substrate · an experimental structure of the same protein · chain A against B, TM-score 0.94
3Q8X · Structure of a toxin-antitoxin system bound to its substrate · an experimental structure of the same protein · chain A against B, TM-score 0.94
1GVN · Crystal Structure of the Plasmid Maintenance System epsilon/zeta: Meachnism of toxin… · an experimental structure of the same protein · chain A against B, TM-score 0.94
1GVN · Crystal structure of the plasmid maintenance system EPSILON/ZETA: meachnism of toxin… · an experimental structure of the same protein · chain A against B, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q54944
Elsewhere: UniProt Q54944 · AlphaFold DB Q54944

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.